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Sunday, April 05, 2020

Accelerating Discoveries with Data

Had not seen this effort yet, worth a look.

Accelerating data-driven discoveries

Life science companies use Paradigm4’s unique database management system to uncover new insights into human health.

Zach Winn | MIT News Office

As technologies like single-cell genomic sequencing, enhanced biomedical imaging, and medical “internet of things” devices proliferate, key discoveries about human health are increasingly found within vast troves of complex life science and health data.

But drawing meaningful conclusions from that data is a difficult problem that can involve piecing together different data types and manipulating huge data sets in response to varying scientific inquiries. The problem is as much about computer science as it is about other areas of science. That’s where Paradigm4 comes in.

The company, founded by Marilyn Matz SM ’80 and Turing Award winner and MIT Professor Michael Stonebraker, helps pharmaceutical companies, research institutes, and biotech companies turn data into insights.

It accomplishes this with a computational database management system that’s built from the ground up to host the diverse, multifaceted data at the frontiers of life science research. That includes data from sources like national biobanks, clinical trials, the medical internet of things, human cell atlases, medical images, environmental factors, and multi-omics, a field that includes the study of genomes, microbiomes, metabolomes, and more.

On top of the system’s unique architecture, the company has also built data preparation, metadata management, and analytics tools to help users find the important patterns and correlations lurking within all those numbers.

In many instances, customers are exploring data sets the founders say are too large and complex to be represented effectively by traditional database management systems.

“We’re keen to enable scientists and data scientists to do things they couldn’t do before by making it easier for them to deal with large-scale computation and machine-learning on diverse data,” Matz says. “We’re helping scientists and bioinformaticists with collaborative, reproducible research to ask and answer hard questions faster.”  .... " unique database management system to uncover new insights into human health.   ... "

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